[ubuntu/focal-proposed] debian-science 1.11ubuntu1 (Accepted)
Steve Langasek
steve.langasek at ubuntu.com
Thu Oct 31 04:45:14 UTC 2019
debian-science (1.11ubuntu1) focal; urgency=low
* Merge from Debian unstable. Remaining changes:
- Update libsdformat4 to libsdformat6.
- Remove all polybori binary packages from Recommends, Suggests and the
mathematics-dev tasks as those no longer exist in Ubuntu.
* Dropped changes, included in Debian:
- Drop python-cdo dependency, it's no longer build for python2.
- Update gazebo7 to gazebo9.
- Don't recommend removed python-sardana.
* Dropped changes, no longer required:
- Don't recommend ghkl.
debian-science (1.11) unstable; urgency=medium
[ Graham Inggs ]
* tasks/nanoscale-physics: python-ase is now ase
[ Sandro Tosi ]
* tasks/engineering-dev
- Recommends libalberta-dev instead of libalberta2-dev; Closes: #881612
* tasks/nanoscale-physics-dev
- Recommends libsymspg-dev instead of spglib; Closes; #901047
* Drop science-astronomy transitional package; Closes: #939201
* Drop science-astronomy-dev transitional package; Closes: #939202
* Switch every python dependency to Python3 (removing packages no longer
available, commenting out python2-only packages); Closes: #935927
* start of automatic changelog entry *
* Changes in metapackage dependencies
-science-chemistry
removed:
Recommends: python-mzml, python-mmtk, python-openbabel
-science-dataacquisition
added:
Recommends: python3-pyvisa
Suggests: python3-taurus, python3-pytango
removed:
Recommends: python-sardana, python-visa
Suggests: python-taurus, python-pytango
-science-dataacquisition-dev
added:
Recommends: python3-guidata, python3-pygetdata
removed:
Recommends: python-xrayutilities, python3-pygetdata | python-pygetdata,
python3-guidata | python-guidata
-science-distributedcomputing
added:
Recommends: python3-scoop
Suggests: python3-mpi4py
removed:
Recommends: python-scoop, python-mpi
Suggests: python-mpi4py
-science-economics
added:
Recommends: r-cran-rdbnomics, python3-statsmodels, python3-pandasdmx
Suggests: elpa-ess
removed:
Recommends: python-statsmodels, python-quantecon, python-pandasdmx
Suggests: ess
-science-electrophysiology
added:
Suggests: python3-neo
removed:
Suggests: python-spykeutils, python-neo, python-neuroshare
-science-engineering
added:
Recommends: python3-dolfin, python3-fiat, python3-silo,
python3-escript | python3-escript-mpi, python3-admesh,
python3-openturns
removed:
Recommends: python-silo, python-admesh | python3-admesh, python-fiat,
python-openturns, python-escript | python3-escript |
python-escript-mpi | python3-escript-mpi, python-dolfin
-science-engineering-dev
added:
Recommends: python3-pynfft, libalberta-dev, python3-netcdf4
removed:
Recommends: libalberta2-dev, python-collada,
python3-pynfft | python-pynfft, python-netcdf
-science-geography
added:
Recommends: python3-cartopy, python3-mapnik, python3-mapscript
Suggests: python3-pyepsg
removed:
Recommends: merkaartor, ruby-mapscript, imposm,
python3-cartopy | python-cartopy, python-mapscript,
josm-plugins, thuban, python-mapnik
Suggests: python3-pyepsg | python-pyepsg
-science-highenergy-physics
removed:
Recommends: python-rivet, python-lhapdf
-science-imageanalysis-dev
added:
Recommends: python3-imageio
removed:
Recommends: python3-imageio | python-imageio, python-vigra
-science-linguistics
added:
Recommends: python3-pynlpl
Suggests: python3-nltk, python3-snowballstemmer
removed:
Recommends: python3-pynlpl | python-pynlpl
Suggests: python-timbl, python3-snowballstemmer |
python-snowballstemmer, python3-nltk | python-nltk
-science-machine-learning
added:
Recommends: python3-opencv, python3-statsmodels, python3-mdp
removed:
Recommends: python-mlpy, python-mvpa2, python-statsmodels, python-pebl,
python-vigra, python-pymc, python-mdp, python-orange,
python-pyevolve, python-genetic, python-opencv
-science-mathematics
added:
Recommends: python3-dolfin, python3-ffc, python3-minieigen,
python3-deap, python3-openturns, python3-ufl,
python3-sagenb-export
removed:
Recommends: python-sagenb-export | python3-sagenb-export, python-ufl,
python-deap, python-openturns, python-sagenb, python-ffc,
python-dolfin, python-minieigen
-science-mathematics-dev
added:
Recommends: python3-dolfin, python3-dtcwt, python3-linop,
python3-numpy, python3-ffc, python3-ufl, python3-slepc4py,
python3-pyviennacl, python3-numexpr, python3-petsc4py,
python3-openturns, python3-pynfft
removed:
Recommends: python-slepc4py, python3-pynfft | python-pynfft,
python3-numexpr | python-numexpr,
python3-dtcwt | python-dtcwt, python-polybori,
python3-linop | python-linop, python-ufl,
python3-numpy | python-numpy,
python3-pyviennacl | python-pyviennacl, python-openturns,
python-openopt, python-cylp, python-glpk, python-ffc,
python-petsc4py, python-dolfin
-science-meteorology
added:
Recommends: python3-grib
Suggests: python3-openturns
removed:
Recommends: python-sphere, aweather, python-gsw, python-cmor,
python-cdo, python-netcdf, python-ferret, python-drslib,
python-metaconfig, python-grib, python-iapws
Suggests: python-openturns, python-dap
-science-meteorology-dev
added:
Recommends: python3-openturns, python3-ulmo
Suggests: python3-coards
removed:
Recommends: python-openturns, python3-ulmo | python-ulmo
Suggests: python3-coards | python-coards
-science-nanoscale-physics
added:
Recommends: python3-sympy, python3-lmfit, ase, python3-scipy
Suggests: python3-pygraphviz
removed:
Recommends: python-scitools, python-scipy, python-sympy,
python-elemental, python-scientific,
python3-lmfit | python-lmfit, python-ase
Suggests: python-pygraphviz
-science-nanoscale-physics-dev
added:
Recommends: libsymspg-dev, python3-fabio
Suggests: python3-h5py, python3-netcdf4
removed:
Recommends: python-xrayutilities, spglib, python-fabio
Suggests: python-h5py, python-netcdf
-science-neuroscience-cognitive
added:
Recommends: python3-statsmodels, python3-pydicom, python3-nibabel
removed:
Recommends: python-mvpa2, python-statsmodels, python-nibabel,
python-nipy, python-nitime, python-pypsignifit,
python-dipy, python-nipype, python-pyxnat, python-dicom,
python-pyepl
-science-neuroscience-modeling
removed:
Recommends: python-brian
Suggests: python-pynn
-science-numericalcomputation
added:
Recommends: python3-lmfit, python3-bitstring, python3-pysph,
python3-sparse, python3-numpy, python3-tables,
python3-escript | python3-escript-mpi, python3-theano,
python3-deap, python3-arrayfire, python3-matplotlib,
python3-scipy, python3-woo, python3-guiqwt
removed:
Recommends: python-sfepy, python3-arrayfire | python-arrayfire,
python3-scipy | python-scipy,
python3-sparse | python-sparse, python-gts,
python3-deap | python-deap, python3-theano | python-theano,
python3-lmfit | python-lmfit,
python3-tables | python-tables, python-demgengeo,
python-csa, python3-matplotlib | python-matplotlib,
python3-woo | python-woo, python-pysph,
python3-guiqwt | python-guiqwt, python-scitools,
python-escript | python3-escript | python-escript-mpi |
python3-escript-mpi,
python3-bitstring | python-bitstring,
python3-numpy | python-numpy
Suggests: python-sciscipy
-science-physics
added:
Recommends: python3-sympy, python3-deap
removed:
Recommends: python-sympy, python-deap
-science-physics-dev
added:
Recommends: python3-dolfin, python3-multipletau,
libxray-scattering-perl, python3-quantities,
libxray-spacegroup-perl, libxray-absorption-perl,
python3-pynfft
removed:
Recommends: python-openctm, python3-pynfft | python-pynfft,
python-quantities, python3-multipletau | python-multipletau,
python-xrayutilities, python-dolfin
-science-psychophysics
removed:
Recommends: python-pyoptical, python-pyepl
Suggests: python-pyxid
-science-robotics-dev
added:
Recommends: python3-comedilib
removed:
Recommends: python-comedilib
-science-simulations
added:
Recommends: python3-deap, python3-escript | python3-escript-mpi,
python3-woo, python3-pysph
removed:
Recommends: python-sfepy, python3-woo | python-woo, python-pysph,
python-deap,
python-escript | python3-escript | python-escript-mpi |
python3-escript-mpi
-science-statistics
added:
Recommends: python3-statsmodels, elpa-ess, python3-scipy,
python3-openturns, python3-pandas
removed:
Recommends: python-pandas, python-statsmodels, python-scipy,
python-openturns, ess, python-stats
-science-tools
added:
Recommends: python3-hdf5storage, python3-pybind11, python3-h5py
removed:
Recommends: python3-h5py | python-h5py,
python3-pybind11 | python-pybind11,
python3-hdf5storage | python-hdf5storage
Suggests: python-mrjob
-science-viewing
added:
Recommends: python3-pyqtgraph, python3-seaborn, python3-guiqwt,
python3-gnuplot
Suggests: python3-matplotlib, python3-pivy
removed:
Recommends: python-gnuplot, python-pyqtgraph, python-guiqwt,
python-scientific, python-seaborn
Suggests: python-matplotlib, python-scitools, python-pivy
-science-viewing-dev
added:
Recommends: python3-matplotlib-venn, python3-gnuplotlib,
python3-plplot-qt, python3-gnuplot, python3-matplotlib,
python3-pivy, python3-vispy
removed:
Recommends: python-gnuplot, python3-vispy | python-vispy,
python-gnuplotlib, python-matplotlib, python-scitools,
python-plplot-qt, python3-qwt | python-qwt,
python3-matplotlib-venn | python-matplotlib-venn,
python-scientific, python-pivy
-science-workflow
removed:
Recommends: python-nipype
debian-science (1.10) unstable; urgency=medium
* Re-render tasks with Buster release state
* start of automatic changelog entry *
* Changes in metapackage dependencies
-science-mathematics
added:
Recommends: pyomo
debian-science (1.9) unstable; urgency=medium
[ Ruben Undheim ]
* Debian-Electronics is now a separate Debian Pure Blend
[ Jelmer Vernooij ]
* Use secure URI in Homepage field.
[ Andreas Tille ]
* Standards-Version: 4.3.0
* debhelper (>= 12~)
* start of automatic changelog entry *
* Changes in metapackage dependencies
-science-chemistry
added:
Recommends: msxpertsuite
Suggests: python3-periodictable, libschroedinger-coordgenlibs-dev
removed:
Recommends: massxpert
-science-dataacquisition
added:
Recommends: csvkit, lxi-tools, clickhouse-tools
Suggests: binoculars
-science-dataacquisition-dev
added:
Recommends: python3-csvkit, python3-pymeasure, liblxi-dev,
python3-aws-xray-sdk
-science-distributedcomputing
removed:
Recommends: torque-server, torque-common
-science-economics
added:
Suggests: x13as
removed:
Recommends: x13-arima-seats
-science-engineering
added:
Recommends: lxi-tools
-science-engineering-dev
added:
Recommends: libcoin-dev, python3-pygalmesh, liblxi-dev, python3-fluids
removed:
Recommends: libnetcdf-java, libcoin80-dev, libmesh-dev
-science-geography
added:
Recommends: grace, sac2mseed, python-mapscript, ruby-mapscript
Suggests: libmseed-dev
removed:
Recommends: php5-mapscript
Suggests: grace6
-science-highenergy-physics
added:
Recommends: neuron, sasview
-science-highenergy-physics-dev
added:
Recommends: neuron-dev, python3-sasmodels, python3-neuron
-science-imageanalysis
removed:
Suggests: scilab-sivp
-science-linguistics
added:
Recommends: irstlm, spacy, python3-thinc
Suggests: apertium-bel, apertium-oci, apertium-crh, apertium-rus,
apertium-cat-srd, apertium-pol, apertium-crh-tur,
apertium-separable, python3-streamparser, apertium-tur,
apertium-szl, apertium-ukr, apertium-bel-rus
-science-machine-learning
added:
Recommends: python3-lasagne, lua-torch-image, lua-torch-optim,
python3-thinc, lua-torch-nngraph, r-cran-mlr, lua-torch-nn,
r-cran-metrics, python3-amp, python3-keras, spacy,
python3-sklearn, lua-torch-graph, lua-torch-trepl,
lua-torch-xlua
Suggests: libmkldnn-dev, libxsmm-dev, python3-hdmedians, libfclib-dev
removed:
Recommends: python-scikits-learn, lua-torch5
-science-mathematics
added:
Recommends: gap-sonata, cohomcalg, gap-design, gap-laguna, gap-factint,
xcas, form, gap-toric, cryptominisat
removed:
Recommends: scilab-swt, scilab-sivp, scilab-plotlib
-science-mathematics-dev
added:
Recommends: python3-gpyfft, python3-cvxopt, libcvector-dev, libbrial-dev,
libmkl-full-dev, python3-optlang, libbraiding-dev,
libcqrlib-dev, python3-cryptominisat, libxsmm-dev,
python3-bumps, python3-asteval, libblis-dev, python3-brial,
libgemmlowp-dev, python3-cypari2, libcombblas-dev,
libflint-dev, libhomfly-dev, libprimesieve-dev
Suggests: python3-msgpack-numpy
removed:
Recommends: libcvector2-dev, libcqrlib2-dev, libprimesieve6-dev,
libmesh-dev
-science-meteorology
added:
Recommends: libeccodes-tools, ncl-ncarg, coda
removed:
Recommends: ncl, libeccodes-api-tools
-science-meteorology-dev
added:
Recommends: python3-gpyfft, python3-ulmo | python-ulmo, libncarg-bin,
libcoda-dev, libcoda-java, python3-coda
removed:
Recommends: libcoarrays-bin
-science-nanoscale-physics
added:
Recommends: binoculars, cod-tools, libssm-bin
removed:
Recommends: libfftw3-3, scilab-sivp, libxc
-science-nanoscale-physics-dev
added:
Recommends: python3-gpyfft, libcexceptions-dev, python3-pycodcif,
libcod-precision-perl, python3-periodictable,
python3-binoculars, libccp4-dev
removed:
Recommends: crystfel-dev
-science-neuroscience-modeling
added:
Recommends: neuron
-science-numericalcomputation
added:
Recommends: psurface
Suggests: python3-agatedbf, python3-agateexcel, python3-agatesql,
libpsurface-dev
removed:
Recommends: scilab-plotlib, scilab-sivp
Suggests: python3-agate-dbf, python3-agate-sql, python3-agate-excel
-science-physics
removed:
Suggests: scilab-sivp
-science-physics-dev
added:
Recommends: python3-gpyfft, python3-pygalmesh
-science-presentation
added:
Recommends: texlive-latex-extra, dspdfviewer, texlive-publishers
removed:
Recommends: latex-beamer
-science-psychophysics
removed:
Suggests: science-bci
-science-robotics
added:
Recommends: gazebo9, ros-robot, ros-robot-state-publisher
Suggests: libcoin-runtime, vtk7
removed:
Recommends: gazebo7
Suggests: libcoin60-runtime, libvtk5.4
-science-robotics-dev
added:
Recommends: python3-catkin-lint, liborocos-kdl-dev,
libignition-fuel-tools1-dev, ros-environment, libfcl-dev,
libapriltag-dev, libgazebo9-dev, python3-tf2,
liborocos-bfl-dev
removed:
Recommends: libgazebo7-dev
-science-simulations
added:
Recommends: neuron, occt-draw, occt-misc, libkim-api-v2-models, gazebo9
removed:
Recommends: gazebo7
-science-statistics
added:
Suggests: node-shiny-server-client
-science-tools
added:
Recommends: python3-h5netcdf
Suggests: python3-pydap
removed:
Recommends: python3-h5netcdf | python-h5netcdf
Suggests: python3-pydap | python-pydap
-science-typesetting
added:
Recommends: python3-pybtex-docutils, python3-sphinxcontrib.bibtex
removed:
Recommends: pybtex-docutils, sphinxcontrib-bibtex
-science-viewing
added:
Recommends: geg, r-cran-sjplot
Suggests: libcoin-dev, python3-vtk7, vtk7-examples, libsoqt520-dev,
libvtk7-java, tcl-vtk7, libvtk7-dev, libvtk7-qt-dev
removed:
Suggests: libsoqt4-dev, libvtk5-qt4-dev, libvtk-java, libcoin80-dev,
vtk-examples, libvtk5-dev, tcl-vtk, python-vtk
-science-viewing-dev
added:
Recommends: libcoin-dev, python3-vtk7, vtk7-examples, libsoqt520-dev,
python3-qwt3d-qt5, liborigin2-dev, libvtk7-java,
python3-qwt, tcl-vtk7, libqglviewer-dev-qt5, libvtk7-dev,
libqwtplot3d-qt5-dev, libvtk7-qt-dev
Suggests: libcoin-dev
removed:
Recommends: python-vtk6, libsoqt4-dev, libvtk5-qt4-dev, libvtk-java,
libcoin80-dev, vtk-examples, libqwtplot3d-qt4-dev,
libvtk5-dev, tcl-vtk, python-vtk, python-qwt3d-qt4,
libvtk6-java, libqglviewer-dev-qt5 | libqglviewer-dev-qt4,
libvtk6-dev
-science-workflow
added:
Recommends: toil
Suggests: libbenchmark-tools
removed:
Recommends: python-toil
* Removed metapackages:
- science-electronics
debian-science (1.8) unstable; urgency=medium
[ Drew Parsons ]
* Changes in metapackage dependencies
-nanoscale-physics
removed:
Recommends: libblacs-mpi1, libscalapack-mpi1
-nanoscale-physics-dev
removed:
Recommends: libblacs-mpi-dev
[ Andreas Tille ]
* Moved to Salsa
* Since blends-dev now permits "real" Depends it is safer to say
exactly what we mean - thus turning all "Depends" into "Recommends"
explicitly
* Bump versioned Build-Depends-Indep to: blends-dev (>= 0.7~)
* d/compat: 9
* Priority: optional
* Standards-Version: 4.1.5
* Regenerate dependencies using blends-dev
Date: Wed, 30 Oct 2019 21:24:55 -0700
Changed-By: Steve Langasek <steve.langasek at ubuntu.com>
Maintainer: Ubuntu Developers <ubuntu-devel-discuss at lists.ubuntu.com>
https://launchpad.net/ubuntu/+source/debian-science/1.11ubuntu1
-------------- next part --------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 30 Oct 2019 21:24:55 -0700
Source: debian-science
Architecture: source
Version: 1.11ubuntu1
Distribution: focal
Urgency: medium
Maintainer: Ubuntu Developers <ubuntu-devel-discuss at lists.ubuntu.com>
Changed-By: Steve Langasek <steve.langasek at ubuntu.com>
Closes: 881612 935927 939201 939202
Changes:
debian-science (1.11ubuntu1) focal; urgency=low
.
* Merge from Debian unstable. Remaining changes:
- Update libsdformat4 to libsdformat6.
- Remove all polybori binary packages from Recommends, Suggests and the
mathematics-dev tasks as those no longer exist in Ubuntu.
* Dropped changes, included in Debian:
- Drop python-cdo dependency, it's no longer build for python2.
- Update gazebo7 to gazebo9.
- Don't recommend removed python-sardana.
* Dropped changes, no longer required:
- Don't recommend ghkl.
.
debian-science (1.11) unstable; urgency=medium
.
[ Graham Inggs ]
* tasks/nanoscale-physics: python-ase is now ase
.
[ Sandro Tosi ]
* tasks/engineering-dev
- Recommends libalberta-dev instead of libalberta2-dev; Closes: #881612
* tasks/nanoscale-physics-dev
- Recommends libsymspg-dev instead of spglib; Closes; #901047
* Drop science-astronomy transitional package; Closes: #939201
* Drop science-astronomy-dev transitional package; Closes: #939202
* Switch every python dependency to Python3 (removing packages no longer
available, commenting out python2-only packages); Closes: #935927
.
* start of automatic changelog entry *
.
* Changes in metapackage dependencies
-science-chemistry
removed:
Recommends: python-mzml, python-mmtk, python-openbabel
-science-dataacquisition
added:
Recommends: python3-pyvisa
Suggests: python3-taurus, python3-pytango
removed:
Recommends: python-sardana, python-visa
Suggests: python-taurus, python-pytango
-science-dataacquisition-dev
added:
Recommends: python3-guidata, python3-pygetdata
removed:
Recommends: python-xrayutilities, python3-pygetdata | python-pygetdata,
python3-guidata | python-guidata
-science-distributedcomputing
added:
Recommends: python3-scoop
Suggests: python3-mpi4py
removed:
Recommends: python-scoop, python-mpi
Suggests: python-mpi4py
-science-economics
added:
Recommends: r-cran-rdbnomics, python3-statsmodels, python3-pandasdmx
Suggests: elpa-ess
removed:
Recommends: python-statsmodels, python-quantecon, python-pandasdmx
Suggests: ess
-science-electrophysiology
added:
Suggests: python3-neo
removed:
Suggests: python-spykeutils, python-neo, python-neuroshare
-science-engineering
added:
Recommends: python3-dolfin, python3-fiat, python3-silo,
python3-escript | python3-escript-mpi, python3-admesh,
python3-openturns
removed:
Recommends: python-silo, python-admesh | python3-admesh, python-fiat,
python-openturns, python-escript | python3-escript |
python-escript-mpi | python3-escript-mpi, python-dolfin
-science-engineering-dev
added:
Recommends: python3-pynfft, libalberta-dev, python3-netcdf4
removed:
Recommends: libalberta2-dev, python-collada,
python3-pynfft | python-pynfft, python-netcdf
-science-geography
added:
Recommends: python3-cartopy, python3-mapnik, python3-mapscript
Suggests: python3-pyepsg
removed:
Recommends: merkaartor, ruby-mapscript, imposm,
python3-cartopy | python-cartopy, python-mapscript,
josm-plugins, thuban, python-mapnik
Suggests: python3-pyepsg | python-pyepsg
-science-highenergy-physics
removed:
Recommends: python-rivet, python-lhapdf
-science-imageanalysis-dev
added:
Recommends: python3-imageio
removed:
Recommends: python3-imageio | python-imageio, python-vigra
-science-linguistics
added:
Recommends: python3-pynlpl
Suggests: python3-nltk, python3-snowballstemmer
removed:
Recommends: python3-pynlpl | python-pynlpl
Suggests: python-timbl, python3-snowballstemmer |
python-snowballstemmer, python3-nltk | python-nltk
-science-machine-learning
added:
Recommends: python3-opencv, python3-statsmodels, python3-mdp
removed:
Recommends: python-mlpy, python-mvpa2, python-statsmodels, python-pebl,
python-vigra, python-pymc, python-mdp, python-orange,
python-pyevolve, python-genetic, python-opencv
-science-mathematics
added:
Recommends: python3-dolfin, python3-ffc, python3-minieigen,
python3-deap, python3-openturns, python3-ufl,
python3-sagenb-export
removed:
Recommends: python-sagenb-export | python3-sagenb-export, python-ufl,
python-deap, python-openturns, python-sagenb, python-ffc,
python-dolfin, python-minieigen
-science-mathematics-dev
added:
Recommends: python3-dolfin, python3-dtcwt, python3-linop,
python3-numpy, python3-ffc, python3-ufl, python3-slepc4py,
python3-pyviennacl, python3-numexpr, python3-petsc4py,
python3-openturns, python3-pynfft
removed:
Recommends: python-slepc4py, python3-pynfft | python-pynfft,
python3-numexpr | python-numexpr,
python3-dtcwt | python-dtcwt, python-polybori,
python3-linop | python-linop, python-ufl,
python3-numpy | python-numpy,
python3-pyviennacl | python-pyviennacl, python-openturns,
python-openopt, python-cylp, python-glpk, python-ffc,
python-petsc4py, python-dolfin
-science-meteorology
added:
Recommends: python3-grib
Suggests: python3-openturns
removed:
Recommends: python-sphere, aweather, python-gsw, python-cmor,
python-cdo, python-netcdf, python-ferret, python-drslib,
python-metaconfig, python-grib, python-iapws
Suggests: python-openturns, python-dap
-science-meteorology-dev
added:
Recommends: python3-openturns, python3-ulmo
Suggests: python3-coards
removed:
Recommends: python-openturns, python3-ulmo | python-ulmo
Suggests: python3-coards | python-coards
-science-nanoscale-physics
added:
Recommends: python3-sympy, python3-lmfit, ase, python3-scipy
Suggests: python3-pygraphviz
removed:
Recommends: python-scitools, python-scipy, python-sympy,
python-elemental, python-scientific,
python3-lmfit | python-lmfit, python-ase
Suggests: python-pygraphviz
-science-nanoscale-physics-dev
added:
Recommends: libsymspg-dev, python3-fabio
Suggests: python3-h5py, python3-netcdf4
removed:
Recommends: python-xrayutilities, spglib, python-fabio
Suggests: python-h5py, python-netcdf
-science-neuroscience-cognitive
added:
Recommends: python3-statsmodels, python3-pydicom, python3-nibabel
removed:
Recommends: python-mvpa2, python-statsmodels, python-nibabel,
python-nipy, python-nitime, python-pypsignifit,
python-dipy, python-nipype, python-pyxnat, python-dicom,
python-pyepl
-science-neuroscience-modeling
removed:
Recommends: python-brian
Suggests: python-pynn
-science-numericalcomputation
added:
Recommends: python3-lmfit, python3-bitstring, python3-pysph,
python3-sparse, python3-numpy, python3-tables,
python3-escript | python3-escript-mpi, python3-theano,
python3-deap, python3-arrayfire, python3-matplotlib,
python3-scipy, python3-woo, python3-guiqwt
removed:
Recommends: python-sfepy, python3-arrayfire | python-arrayfire,
python3-scipy | python-scipy,
python3-sparse | python-sparse, python-gts,
python3-deap | python-deap, python3-theano | python-theano,
python3-lmfit | python-lmfit,
python3-tables | python-tables, python-demgengeo,
python-csa, python3-matplotlib | python-matplotlib,
python3-woo | python-woo, python-pysph,
python3-guiqwt | python-guiqwt, python-scitools,
python-escript | python3-escript | python-escript-mpi |
python3-escript-mpi,
python3-bitstring | python-bitstring,
python3-numpy | python-numpy
Suggests: python-sciscipy
-science-physics
added:
Recommends: python3-sympy, python3-deap
removed:
Recommends: python-sympy, python-deap
-science-physics-dev
added:
Recommends: python3-dolfin, python3-multipletau,
libxray-scattering-perl, python3-quantities,
libxray-spacegroup-perl, libxray-absorption-perl,
python3-pynfft
removed:
Recommends: python-openctm, python3-pynfft | python-pynfft,
python-quantities, python3-multipletau | python-multipletau,
python-xrayutilities, python-dolfin
-science-psychophysics
removed:
Recommends: python-pyoptical, python-pyepl
Suggests: python-pyxid
-science-robotics-dev
added:
Recommends: python3-comedilib
removed:
Recommends: python-comedilib
-science-simulations
added:
Recommends: python3-deap, python3-escript | python3-escript-mpi,
python3-woo, python3-pysph
removed:
Recommends: python-sfepy, python3-woo | python-woo, python-pysph,
python-deap,
python-escript | python3-escript | python-escript-mpi |
python3-escript-mpi
-science-statistics
added:
Recommends: python3-statsmodels, elpa-ess, python3-scipy,
python3-openturns, python3-pandas
removed:
Recommends: python-pandas, python-statsmodels, python-scipy,
python-openturns, ess, python-stats
-science-tools
added:
Recommends: python3-hdf5storage, python3-pybind11, python3-h5py
removed:
Recommends: python3-h5py | python-h5py,
python3-pybind11 | python-pybind11,
python3-hdf5storage | python-hdf5storage
Suggests: python-mrjob
-science-viewing
added:
Recommends: python3-pyqtgraph, python3-seaborn, python3-guiqwt,
python3-gnuplot
Suggests: python3-matplotlib, python3-pivy
removed:
Recommends: python-gnuplot, python-pyqtgraph, python-guiqwt,
python-scientific, python-seaborn
Suggests: python-matplotlib, python-scitools, python-pivy
-science-viewing-dev
added:
Recommends: python3-matplotlib-venn, python3-gnuplotlib,
python3-plplot-qt, python3-gnuplot, python3-matplotlib,
python3-pivy, python3-vispy
removed:
Recommends: python-gnuplot, python3-vispy | python-vispy,
python-gnuplotlib, python-matplotlib, python-scitools,
python-plplot-qt, python3-qwt | python-qwt,
python3-matplotlib-venn | python-matplotlib-venn,
python-scientific, python-pivy
-science-workflow
removed:
Recommends: python-nipype
.
debian-science (1.10) unstable; urgency=medium
.
* Re-render tasks with Buster release state
.
* start of automatic changelog entry *
.
* Changes in metapackage dependencies
-science-mathematics
added:
Recommends: pyomo
.
debian-science (1.9) unstable; urgency=medium
.
[ Ruben Undheim ]
* Debian-Electronics is now a separate Debian Pure Blend
.
[ Jelmer Vernooij ]
* Use secure URI in Homepage field.
.
[ Andreas Tille ]
* Standards-Version: 4.3.0
* debhelper (>= 12~)
.
* start of automatic changelog entry *
.
* Changes in metapackage dependencies
-science-chemistry
added:
Recommends: msxpertsuite
Suggests: python3-periodictable, libschroedinger-coordgenlibs-dev
removed:
Recommends: massxpert
-science-dataacquisition
added:
Recommends: csvkit, lxi-tools, clickhouse-tools
Suggests: binoculars
-science-dataacquisition-dev
added:
Recommends: python3-csvkit, python3-pymeasure, liblxi-dev,
python3-aws-xray-sdk
-science-distributedcomputing
removed:
Recommends: torque-server, torque-common
-science-economics
added:
Suggests: x13as
removed:
Recommends: x13-arima-seats
-science-engineering
added:
Recommends: lxi-tools
-science-engineering-dev
added:
Recommends: libcoin-dev, python3-pygalmesh, liblxi-dev, python3-fluids
removed:
Recommends: libnetcdf-java, libcoin80-dev, libmesh-dev
-science-geography
added:
Recommends: grace, sac2mseed, python-mapscript, ruby-mapscript
Suggests: libmseed-dev
removed:
Recommends: php5-mapscript
Suggests: grace6
-science-highenergy-physics
added:
Recommends: neuron, sasview
-science-highenergy-physics-dev
added:
Recommends: neuron-dev, python3-sasmodels, python3-neuron
-science-imageanalysis
removed:
Suggests: scilab-sivp
-science-linguistics
added:
Recommends: irstlm, spacy, python3-thinc
Suggests: apertium-bel, apertium-oci, apertium-crh, apertium-rus,
apertium-cat-srd, apertium-pol, apertium-crh-tur,
apertium-separable, python3-streamparser, apertium-tur,
apertium-szl, apertium-ukr, apertium-bel-rus
-science-machine-learning
added:
Recommends: python3-lasagne, lua-torch-image, lua-torch-optim,
python3-thinc, lua-torch-nngraph, r-cran-mlr, lua-torch-nn,
r-cran-metrics, python3-amp, python3-keras, spacy,
python3-sklearn, lua-torch-graph, lua-torch-trepl,
lua-torch-xlua
Suggests: libmkldnn-dev, libxsmm-dev, python3-hdmedians, libfclib-dev
removed:
Recommends: python-scikits-learn, lua-torch5
-science-mathematics
added:
Recommends: gap-sonata, cohomcalg, gap-design, gap-laguna, gap-factint,
xcas, form, gap-toric, cryptominisat
removed:
Recommends: scilab-swt, scilab-sivp, scilab-plotlib
-science-mathematics-dev
added:
Recommends: python3-gpyfft, python3-cvxopt, libcvector-dev, libbrial-dev,
libmkl-full-dev, python3-optlang, libbraiding-dev,
libcqrlib-dev, python3-cryptominisat, libxsmm-dev,
python3-bumps, python3-asteval, libblis-dev, python3-brial,
libgemmlowp-dev, python3-cypari2, libcombblas-dev,
libflint-dev, libhomfly-dev, libprimesieve-dev
Suggests: python3-msgpack-numpy
removed:
Recommends: libcvector2-dev, libcqrlib2-dev, libprimesieve6-dev,
libmesh-dev
-science-meteorology
added:
Recommends: libeccodes-tools, ncl-ncarg, coda
removed:
Recommends: ncl, libeccodes-api-tools
-science-meteorology-dev
added:
Recommends: python3-gpyfft, python3-ulmo | python-ulmo, libncarg-bin,
libcoda-dev, libcoda-java, python3-coda
removed:
Recommends: libcoarrays-bin
-science-nanoscale-physics
added:
Recommends: binoculars, cod-tools, libssm-bin
removed:
Recommends: libfftw3-3, scilab-sivp, libxc
-science-nanoscale-physics-dev
added:
Recommends: python3-gpyfft, libcexceptions-dev, python3-pycodcif,
libcod-precision-perl, python3-periodictable,
python3-binoculars, libccp4-dev
removed:
Recommends: crystfel-dev
-science-neuroscience-modeling
added:
Recommends: neuron
-science-numericalcomputation
added:
Recommends: psurface
Suggests: python3-agatedbf, python3-agateexcel, python3-agatesql,
libpsurface-dev
removed:
Recommends: scilab-plotlib, scilab-sivp
Suggests: python3-agate-dbf, python3-agate-sql, python3-agate-excel
-science-physics
removed:
Suggests: scilab-sivp
-science-physics-dev
added:
Recommends: python3-gpyfft, python3-pygalmesh
-science-presentation
added:
Recommends: texlive-latex-extra, dspdfviewer, texlive-publishers
removed:
Recommends: latex-beamer
-science-psychophysics
removed:
Suggests: science-bci
-science-robotics
added:
Recommends: gazebo9, ros-robot, ros-robot-state-publisher
Suggests: libcoin-runtime, vtk7
removed:
Recommends: gazebo7
Suggests: libcoin60-runtime, libvtk5.4
-science-robotics-dev
added:
Recommends: python3-catkin-lint, liborocos-kdl-dev,
libignition-fuel-tools1-dev, ros-environment, libfcl-dev,
libapriltag-dev, libgazebo9-dev, python3-tf2,
liborocos-bfl-dev
removed:
Recommends: libgazebo7-dev
-science-simulations
added:
Recommends: neuron, occt-draw, occt-misc, libkim-api-v2-models, gazebo9
removed:
Recommends: gazebo7
-science-statistics
added:
Suggests: node-shiny-server-client
-science-tools
added:
Recommends: python3-h5netcdf
Suggests: python3-pydap
removed:
Recommends: python3-h5netcdf | python-h5netcdf
Suggests: python3-pydap | python-pydap
-science-typesetting
added:
Recommends: python3-pybtex-docutils, python3-sphinxcontrib.bibtex
removed:
Recommends: pybtex-docutils, sphinxcontrib-bibtex
-science-viewing
added:
Recommends: geg, r-cran-sjplot
Suggests: libcoin-dev, python3-vtk7, vtk7-examples, libsoqt520-dev,
libvtk7-java, tcl-vtk7, libvtk7-dev, libvtk7-qt-dev
removed:
Suggests: libsoqt4-dev, libvtk5-qt4-dev, libvtk-java, libcoin80-dev,
vtk-examples, libvtk5-dev, tcl-vtk, python-vtk
-science-viewing-dev
added:
Recommends: libcoin-dev, python3-vtk7, vtk7-examples, libsoqt520-dev,
python3-qwt3d-qt5, liborigin2-dev, libvtk7-java,
python3-qwt, tcl-vtk7, libqglviewer-dev-qt5, libvtk7-dev,
libqwtplot3d-qt5-dev, libvtk7-qt-dev
Suggests: libcoin-dev
removed:
Recommends: python-vtk6, libsoqt4-dev, libvtk5-qt4-dev, libvtk-java,
libcoin80-dev, vtk-examples, libqwtplot3d-qt4-dev,
libvtk5-dev, tcl-vtk, python-vtk, python-qwt3d-qt4,
libvtk6-java, libqglviewer-dev-qt5 | libqglviewer-dev-qt4,
libvtk6-dev
-science-workflow
added:
Recommends: toil
Suggests: libbenchmark-tools
removed:
Recommends: python-toil
* Removed metapackages:
- science-electronics
.
debian-science (1.8) unstable; urgency=medium
.
[ Drew Parsons ]
* Changes in metapackage dependencies
-nanoscale-physics
removed:
Recommends: libblacs-mpi1, libscalapack-mpi1
-nanoscale-physics-dev
removed:
Recommends: libblacs-mpi-dev
.
[ Andreas Tille ]
* Moved to Salsa
* Since blends-dev now permits "real" Depends it is safer to say
exactly what we mean - thus turning all "Depends" into "Recommends"
explicitly
* Bump versioned Build-Depends-Indep to: blends-dev (>= 0.7~)
* d/compat: 9
* Priority: optional
* Standards-Version: 4.1.5
* Regenerate dependencies using blends-dev
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Original-Maintainer: Debian Science Team <debian-science-maintainers at lists.alioth.debian.org>
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