Accepted mcl 1:05-321-1 (source)

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Origin: Debian/unstable
Format: 1.7
Date: Thu,  24 Nov 2005 04:52:08 +0000
Source: mcl
Binary: mcl, mcl-doc
Architecture: source
Version: 1:05-321-1
Distribution: dapper
Urgency: low
Maintainer: Joost van Baal <joostvb at debian.org>
Changed-By: Ubuntu Archive Auto-Sync <katie at jackass.ubuntu.com>
Description: 
 mcl        - the Markov Cluster algorithm
Changes: 
 mcl (1:05-321-1) unstable; urgency=low
 .
   * New stable upstream release.  (Missed 05-272, 05-300, 05-314.)
     Some rephrased snippets from the announcement messages:
     + mcl-05-321:
      This mainly adds 'transformation' functionality, which complements the
      label-value streaming stuff.  It means you can apply quite complex
      transformations on values, albeit only context-insensive transformations.
     + mcl-05-314:
      MCL can now read in label input in a simple line based format where
      each lines contains two labels and an optional value separated by
      whitespace.  Output clusters are returned as lines of tab-separated
      labels.  The BLAST parser can stream this format directly to mcl
      creating a very concise and easy to manage sequence clustering
      pipeline.  The mcl(1) manual now has a 'getting started' section
      with some examples.  New utility mcxload(1) with many custom options for
      reading in label data and transforming the associated numerical values,
      storing mappings in tab files and saving a graph in native mcl input
      format.
     + mcl-05-300:
      Important for mcxassemble users: Changed mcxassemble to pick the maximum
      between repeated entries by default.  Other noteworthy changes: mcxdump
      can now also be used to restrict tab files, and: Fixed mcxsubs bug,
      introduced in last release, where selections never materialize unless one
      mysteriously specifies --rand-merge.  No changes in mcl, only stuff done
      to the graph manipulation programs.
     + mcl-05-272:
      Major changes in clmimac, a noticeable change in mclblastline, a minor
      addition to mcxdeblast, improved dump functionality in mcl.  If you just
      use mcl there is little need for upgrading.
     mcl-05-272 adds some extra stuff to doc/mcl/examples/ .
     As always, read changelog for details.
   * debian/mcl-doc.doc-base.mcxload: added
   * debian/{compat,control,rules}: move from debhelper compatibility level 3
     to 4 (add ${misc:Depends} to Depends)
   * debian/copyright: new snailmail address of FSF.
   * debian/watch: make sure it doesn't match the symlink mcl-latest.tar.gz.
   * debian/rules, debian/mcl-doc.install: no longer install upstream TODO file:
     it's not useful for users.
   * debian/control: fix versioned conflicts syntax
   * debian/rules: make proper use of comments: don't clobber build output.
   * debian/control: Standards Version bumped from 3.6.1.0 to 3.6.2.0 (no
     changes needed).
Files: 
 3f59e37b71973311cc84201fd00c338a 21185 math extra mcl_05-321-1.diff.gz
 716a2cb66b5cb0c78c5a3c01d4e7b063 1127577 math extra mcl_05-321.orig.tar.gz
 04933d3ec1a073188e0b84ef21c80356 561 math extra mcl_05-321-1.dsc
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Accepted:
mcl_05-321-1.diff.gz
  to pool/universe/m/mcl/mcl_05-321-1.diff.gz
mcl_05-321-1.dsc
  to pool/universe/m/mcl/mcl_05-321-1.dsc
mcl_05-321.orig.tar.gz
  to pool/universe/m/mcl/mcl_05-321.orig.tar.gz