[Bug 307901] [NEW] Crash with pyMPI that doesn't happen with latest upstream

[gpk]

Public bug reported:

A newer version of openmpi is available upstream: 1.2.8 .

I am using pyMPI-2.5b0 and it crashes and dies if I use the Ubuntu
openmpi binary, but runs fine with the newer upstream.    This occurs on
both 32 and 64-bit Ubuntu, on both Hardy Heron and Intrepid Ibex.  I
realize (of course) that pyMPI is not packaged by Ubuntu -- I compile it
from source.   But the point is, it runs nicely when I compile openmpi
myself,

At the moment, I have no cluse where the bug is, but presumably the
OpenMPI guys (and gals) fixed something since the 1.2.5 version adopted
by Ubuntu.   Sorry for the lack of detail here.

$ lsb_release -rd
Description:	Ubuntu 8.04.1
Release:	8.04
mace:~$ 

~$ apt-cache policy libopenmpi-dev
libopenmpi-dev:
  Installed: 1.2.5-1ubuntu1.1
  Candidate: 1.2.5-1ubuntu1.1
  Version table:
 *** 1.2.5-1ubuntu1.1 0
        500 http://gb.archive.ubuntu.com hardy-updates/universe Packages
        100 /var/lib/dpkg/status
     1.2.5-1ubuntu1 0
        500 http://gb.archive.ubuntu.com hardy/universe Packages
mace:~$ 


$ pyMPI
libibverbs: Fatal: couldn't read uverbs ABI version.
--------------------------------------------------------------------------
[0,0,0]: OpenIB on host mace was unable to find any HCAs.
Another transport will be used instead, although this may result in 
lower performance.
--------------------------------------------------------------------------
Python 2.5.2 (pyMPI 2.5b0) on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import numpy
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/__init__.py", line 93, in <module>
    import add_newdocs
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/add_newdocs.py", line 9, in <module>
    from lib import add_newdoc
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/lib/__init__.py", line 4, in <module>
    from type_check import *
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/lib/type_check.py", line 8, in <module>
    import numpy.core.numeric as _nx
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/core/__init__.py", line 5, in <module>
    import multiarray
ImportError: /home/mace/gpk/local/lib/python2.5/site-packages/numpy/core/multiarray.so: undefined symbol: Py_InitModule4
Error in sys.excepthook:
Traceback (most recent call last):
  File "/usr/lib/python2.5/site-packages/apport_python_hook.py", line 38, in apport_excepthook
    from apport.packaging_impl import impl as packaging
  File "/usr/lib/python2.5/site-packages/apport/__init__.py", line 1, in <module>
    from apport.report import Report
  File "/usr/lib/python2.5/site-packages/apport/report.py", line 21, in <module>
    import fileutils
  File "/usr/lib/python2.5/site-packages/apport/fileutils.py", line 16, in <module>
    from packaging_impl import impl as packaging
  File "/usr/lib/python2.5/site-packages/apport/packaging_impl.py", line 18, in <module>
    import apt
  File "/usr/lib/python2.5/site-packages/apt/__init__.py", line 2, in <module>
    import apt_pkg
ImportError: /usr/lib/python2.5/site-packages/apt_pkg.so: undefined symbol: Py_InitModule4

Original exception was:
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/__init__.py", line 93, in <module>
    import add_newdocs
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/add_newdocs.py", line 9, in <module>
    from lib import add_newdoc
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/lib/__init__.py", line 4, in <module>
    from type_check import *
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/lib/type_check.py", line 8, in <module>
    import numpy.core.numeric as _nx
  File "/home/mace/gpk/local/lib/python2.5/site-packages/numpy/core/__init__.py", line 5, in <module>
    import multiarray
ImportError: /home/mace/gpk/local/lib/python2.5/site-packages/numpy/core/multiarray.so: undefined symbol: Py_InitModule4
[76571 refs]
>>>

** Affects: openmpi (Ubuntu)
     Importance: Undecided
         Status: New

-- 
Crash with pyMPI that doesn't happen with latest upstream
https://bugs.launchpad.net/bugs/307901
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