[Bug 392510] Re: Dual-boot install using mdadm root fails to boot

[danwood76]

After you apt-get remove you must rebuild the initramfs (sudo update-
initramfs -u -k all), as described in my post. From your post it sounds
like the uninstall from apt will remove the initramfs hooks just not
rebuild the array.

As luke said you have one or the other, there is no advantage of using
both types on one drive.

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Dual-boot install using mdadm root fails to boot
https://bugs.launchpad.net/bugs/392510
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